Diagnosing sclerotinia collar rot in narrow-leafed lupins

Sclerotinia collar rot is caused by the fungus Sclerotinia minor and should not be confused with Sclerotinia sclerotiorum , which causes a stem rot higher up the plant.

 

Collar rot fungal web spreading between plants
White fungal area with embedded sclerotes girdling the stem after plant death
Sclerotes do not occur inside the infected stem
Isolated plants or small groups that wilt then die in spring

What to look for

    Paddock

  • Isolated plants or small groups that wilt and prematurely die in spring.
  • Lush, wet crops are most affected.

    Plant

  • White fungal growth is evident on the stem just above ground level of infected plants.
  • The fungal growth contains small black fruiting bodies, about the size of a pinhead called sclerotia.

What else could it be

Condition Similarities Differences
Diagnosing spring drought in narrow-leafed lupins Premature death. No white cottony growth.
Diagnosing salinity in narrow-leafed lupins Premature death. No white cottony growth.
Diagnosing charcoal rot in narrow-leafed lupins Premature death. No white cottony growth.; ash grey root interior
Diagnosing grey mould in narrow-leafed lupins Stem lesions, premature death. Grey fuzzy growth.on stem instead of white cottony growth.

Where did it come from?

Contaminated soil
Contaminated soil
Contaminated stubble
Contaminated stubble
  • The fungus survives between seasons as sclerotia in trash and soil. The sclerotia germinate under suitable environmental conditions and infect plants as fungus grows out from the sclerotia.
  • Sclerotinia minor can infect many broad leaf crops, pastures and weeds and is most common in rotations containing broad leaf species in close succession (for example, lupin following canola).

Management strategies

  • Sclerotinia collar rot rarely causes large yield reductions.
  • Cereals do not host the fungus and will help reduce inoculum levels.

Where to go for expert help

DDLS Seed Testing and Certification
+61 (0)8 9368 3721
Page last updated: Friday, 17 April 2015 - 2:30pm